Eutr15 (DF0001262)

Ancient interspersed repetitive sequence from eutherian mammals.

Description

8 bp TSDs. Imperfect 15 bp TIRs. No recognized similarities to other TIRs, but pos 546-659 (faintly) match the very N-term of the Tip100 158138577_Api transposase. Absent in opossum.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100?

Note: Uncertain classification.

Hit Statistics

The model is 923 positions long. The average length of non-redundant hits to the model is 348.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 121 148 85 101
Homo sapiens 500 723 440 596

External Database Links