hAT-Tip100 DNA transposon, Zaphod5a subfamily
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
8 bp TSD (hard to see). TIRs distantly shared with family members DNA8-60_AP in the pea aphid and hAT-N1001d3_Croc in ancient crocodilians. Pos 127-222 is the remainder of the coding region, matching the C-terminus of Zaphod and Arthur transposases. Present in placentals, absent from marsupials.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 504 positions long. The average length of non-redundant hits to the model is 299.6. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
None recorded for this entry