Zaphod5a (DF0001254)

hAT-Tip100 DNA transposon, Zaphod5a subfamily

Description

8 bp TSD (hard to see). TIRs distantly shared with family members DNA8-60_AP in the pea aphid and hAT-N1001d3_Croc in ancient crocodilians. Pos 127-222 is the remainder of the coding region, matching the C-terminus of Zaphod and Arthur transposases. Present in placentals, absent from marsupials.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 504 positions long. The average length of non-redundant hits to the model is 299.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 23 40 19 28
Homo sapiens 65 143 55 114

External Database Links

None recorded for this entry