TcMar-Tc2 DNA transposon, EutTc1-N2 subfamily
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Hairpin with just pos 177-204 as a unique loop (the first/final 168 bp are basically the same as in EutTc1-N1). Present at orthologous sites in all eutheria, absent from marsupials.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 378 positions long. The average length of non-redundant hits to the model is 208.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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