EutTc1-N2 (DF0001231)

TcMar-Tc2 DNA transposon, EutTc1-N2 subfamily

Description

Hairpin with just pos 177-204 as a unique loop (the first/final 168 bp are basically the same as in EutTc1-N1). Present at orthologous sites in all eutheria, absent from marsupials.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tc1

Hit Statistics

The model is 378 positions long. The average length of non-redundant hits to the model is 208.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 36 81 19 39
Homo sapiens 105 452 91 363

External Database Links

None recorded for this entry