EUTREP7 (DF0001220)

Conserved repetitive element present in placental mammals.

Description

4 bp TSDs. Orientation confirmed with appropriately placed AATAAA signal. ERV1 designation is uncertain, as other LTR elements with 4 bp TSDs have been identified.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 392 positions long. The average length of non-redundant hits to the model is 291.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 55 69 51 61
Homo sapiens 172 287 152 243

External Database Links

  • Repbase : EUTREP7 [Requires Repbase registration]