X24_DNA (DF0001219)

Conserved repeat present in placental mammals and marsupials.

Description

61 bp TIR. Present at orthologous sites in all theria, absent from platypus.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 173 positions long. The average length of non-redundant hits to the model is 140. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 153 215 70 96
Homo sapiens 895 1355 349 476

External Database Links

  • Repbase : X24_DNA [Requires Repbase registration]