X20_LINE (DF0001218)

Repetitive element conserved in all mammals.

Description

Contains coding sequences of CR1 type Non-LTR retrotransposon.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily CR1

Hit Statistics

The model is 253 positions long. The average length of non-redundant hits to the model is 172.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 85 201 47 110
Homo sapiens 251 1020 105 349

External Database Links

  • Repbase : X20_LINE [Requires Repbase registration]