UCON89 (DF0001213)

Repetitive element conserved in all mammals.

Description

8 bp TSDs. 15 bp TIRs.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT?

Note: Uncertain classification.

Hit Statistics

The model is 242 positions long. The average length of non-redundant hits to the model is 199.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 35 35 23 23
Homo sapiens 72 74 58 58

External Database Links

  • Repbase : UCON89 [Requires Repbase registration]