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Part of the 3'end of a Penelope probably active some 350 million years ago. Conserved copies found in Xenopus, alligator, turtle, chicken, platypus, and our boreoeutherian ancestor. The ORF from pos 2-946 encodes a protein similar the end of Neptune1_Nv_pol. The last 130 bp are likely to be a terminal direct repeat, though the other end is not yet defined. Part of the coding region (current pos 182-463) was originally named UCON13 as it appeared in a number of ultraconserved regions.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1079 positions long. The average length of non-redundant hits to the model is 284.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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