UCON65 (DF0001205)

Repetitive element conserved in all mammals.

Description

Hairpin at 81-177. Nearly perfect hairpin at positions 239-400 with loop from 306-335.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 442 positions long. The average length of non-redundant hits to the model is 201.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 25 56 13 26
Homo sapiens 38 76 29 55

External Database Links

  • Repbase : UCON65 [Requires Repbase registration]