UCON80 (DF0001188)

Repetitive element conserved in all mammals.

Description

8 bp TSDs, 12 bp TIRs.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT?

Note: Uncertain classification.

Hit Statistics

The model is 142 positions long. The average length of non-redundant hits to the model is 123.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 19 29 11 17
Homo sapiens 35 61 22 33

External Database Links

  • Repbase : UCON80 [Requires Repbase registration]