UCON66 (DF0001185)

Repetitive element conserved in all mammals.


Ends are unsettled. Quite diverged hairpin from pos 298 to 459; the corresponding hairpin in UCON65 is near-perfect.


  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed


Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 564 positions long. The average length of non-redundant hits to the model is 254.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 45 54 35 38
Homo sapiens 96 114 72 82

External Database Links

  • Repbase : UCON66 [Requires Repbase registration]