MARE6 (DF0001184)

Repetitive element conserved in all mammals.

Description

ORF from 470-1289 (current end) encoded a protein similar to KenoDr1_gag and KenoFr1_gag of Tx1 elements in zebrafish and puffer fish, respectively. Some orthologous copies shared with marsupials

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1-Tx1

Hit Statistics

The model is 1289 positions long. The average length of non-redundant hits to the model is 406.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 52 54 45 47
Homo sapiens 171 232 139 181

External Database Links

  • Repbase : MARE6 [Requires Repbase registration]