MamRep605b -- putative LTR of an unclassified retrotransposon
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Pos 246 - 907 similar to MamRep605, which is tentatively classified as an LTR. Corroborating this is a complex subfamily structure and the preservation of the AATAAA site between the elements. Termini are not yet determined. Copies in marsupials may be from a closely related subfamily.
Note: Uncertain classification.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 901 positions long. The average length of non-redundant hits to the model is 281. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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