RTE-BovB retrotransposon, MamRTE2 subfamily
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ORF from 2-1495. Seen both in platypus and eutherians (in relatively low copy number), the Therian copies seem somewhat different from the monotreme copies, but subfamilies are elusive. Very similar to RTE-2_Croc, but probably not the same elements.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1552 positions long. The average length of non-redundant hits to the model is 277.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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