Ancient hAT DNA transposon from eutherian mammals.
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>74% identical to consensus. It encodes remnants of transposase. No copies in opossum. ORF 727-2562 encoded a transposase closest related to HAT-12_XT_tp of Xenopus and HAT5_CI_tp and HAT1_CI_tp of Ciona. Present at orthologous sites throughout Eutheria, but not in marsupials.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 2747 positions long. The average length of non-redundant hits to the model is 461.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|