EuthAT-2 (DF0001172)

Ancient hAT DNA transposon from eutherian mammals.

Description

>74% identical to consensus. It encodes remnants of transposase. No copies in opossum. ORF 727-2562 encoded a transposase closest related to HAT-12_XT_tp of Xenopus and HAT5_CI_tp and HAT1_CI_tp of Ciona. Present at orthologous sites throughout Eutheria, but not in marsupials.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Ac

Hit Statistics

The model is 2747 positions long. The average length of non-redundant hits to the model is 461.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 242 324 186 234
Homo sapiens 544 1082 512 965

External Database Links