MamGypLTR4 (Long Terminal Repeat) for Gypsy retrotransposon
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Orientation based on that of related elements, though no poly A signal is apparent. Present at orthologous sites in all eutheria.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 938 positions long. The average length of non-redundant hits to the model is 303.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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