EutTc1-N1 (DF0001170)

Ancient Mariner/Tc1 DNA transposon from eutherian mammals.

Description

Almost identical to Tc1-N1_MD in marsupials. No evidence for orthologous copies between marsupials and eutheria. A more common related element is EutTc1-N2, that is more or less a hairpin loop of the first 166 bp of EutTc1-N1.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tc1

Hit Statistics

The model is 588 positions long. The average length of non-redundant hits to the model is 206.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 8 47 5 14
Homo sapiens 43 361 34 266

External Database Links