EuthAT-N1 (DF0001168)

Ancient hAT DNA transposon from eutherian mammals.

Description

8 b TSDs. Bit improved (original entry 91% similar to pos 1 -325). Very similar to hAT-N1_MD in marsupials, but a different non-autonomous deletion product. At orthologous sites in all eutheria, but apparently absent in marsupials.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 335 positions long. The average length of non-redundant hits to the model is 207.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 18 30 9 17
Homo sapiens 89 150 64 103

External Database Links