Eutr11 (DF0001164)

Ancient interspersed repetitive sequence from eutherian mammals.

Description

24 bp TIRs, so likely a DNA transposon, but no obvious TSDs and TIRs do not match other DNA transposon ends yet. The element carries about 2.5 tandem copies of a 146 bp unit from pos 250-618. Present at orthologous sites in elephants and humans, absent in opossum.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 857 positions long. The average length of non-redundant hits to the model is 318.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 152 186 92 104
Homo sapiens 405 730 339 583

External Database Links