UCON83 (DF0001157)

Repetitive element conserved in all mammals.

Description

Near-perfect hairpin with 12 bp loop.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Note: Uncertain classification.

Hit Statistics

The model is 128 positions long. The average length of non-redundant hits to the model is 113.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 35 54 22 31
Homo sapiens 144 228 57 84

External Database Links

  • Repbase : UCON83 [Requires Repbase registration]