UCON101 (DF0001151)

Conserved repeat present in placental mammals and marsupials.

Description

Found in eutheria and marsupials, but not in monotremes. Currently has LTR-like termini, but neither TSDs nor a poly A signal have been identified.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 426 positions long. The average length of non-redundant hits to the model is 242.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 21 22 14 15
Homo sapiens 315 386 208 251

External Database Links

  • Repbase : UCON101 [Requires Repbase registration]