X9b_DNA (DF0001146)

Putative TcMar-Tigger DNA transposon, X9b_DNA subfamily (non-autonomous)

Description

Incomplete reconstruction. Found in placental and marsupial mammals; uncertain identification in platypus.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tigger

Hit Statistics

The model is 1018 positions long. The average length of non-redundant hits to the model is 303.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 105 126 71 75
Homo sapiens 577 774 396 476

External Database Links

  • Repbase : X9b_DNA [Requires Repbase registration]