MLT1G (DF0001130)

MLT1G Long Terminal Repeat for ERVL-MaLR retrotransposon

Description

A full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

References

  1. Identification of a new, abundant superfamily of mammalian LTR-transposons.
    Smit AF;
    Nucleic Acids Res 1993;21:1863-1872 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 591 positions long. The average length of non-redundant hits to the model is 337.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 903 7394 580 2896
Homo sapiens 2217 58530 1950 32413

External Database Links

  • Repbase : MLT1G2 [Requires Repbase registration]