Zaphod (DF0001123)

hAT-Tip100 DNA transposon, Zaphod subfamily

Description

ZAPHOD is a hAT DNA transposon with imperfect 14bp TIRs and 8bp TSDs. Most copies are an internal deletion product missing 990..3586. MER115 represents an effectively identical, internal deletion of Zaphod.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 4079 positions long. The average length of non-redundant hits to the model is 459.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 434 857 334 566
Homo sapiens 1032 3426 964 2733

External Database Links

  • Repbase : ZAPHOD [Requires Repbase registration]