UCON9 (DF0001112)

Interspersed repeats conserved in mammals and birds, UCON9 subfamily

Description

The full length of UCON9 is similar to the 3' end of UCON27 (a much longer element), suggesting that these may be retrotransposons.

References

  1. Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.
    Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J;
    Genome Res 2007;17:992-1004 Pubmed

  2. Repetitive sequences in complex genomes: structure and evolution.
    Jurka J, Kapitonov VV, Kohany O, Jurka MV;
    Annu Rev Genomics Hum Genet 2007;8:241-259 Pubmed

Classification

Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 1358 positions long. The average length of non-redundant hits to the model is 271.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 44 84 34 61
Homo sapiens 113 194 83 141

External Database Links

  • Repbase : UCON9 [Requires Repbase registration] Report