UCON6 (DF0001110)

Interspersed repeats conserved in mammals and birds, UCON6 subfamily

Description

Roughly half of human copies are in highly conserved regions.

References

  1. Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.
    Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J;
    Genome Res 2007;17:992-1004 Pubmed

  2. Repetitive sequences in complex genomes: structure and evolution.
    Jurka J, Kapitonov VV, Kohany O, Jurka MV;
    Annu Rev Genomics Hum Genet 2007;8:241-259 Pubmed

Classification

Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 437 positions long. The average length of non-redundant hits to the model is 240.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 42 44 26 27
Homo sapiens 114 121 80 83

External Database Links

  • Repbase : UCON6 [Requires Repbase registration] Report