UCON5 (DF0001109)

Interspersed repeats conserved in mammals and birds, UCON5 subfamily


Found in human, chicken, and alligator.


  1. Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.
    Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J;
    Genome Res 2007;17:992-1004 Pubmed

  2. Repetitive sequences in complex genomes: structure and evolution.
    Jurka J, Kapitonov VV, Kohany O, Jurka MV;
    Annu Rev Genomics Hum Genet 2007;8:241-259 Pubmed


Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 435 positions long. The average length of non-redundant hits to the model is 206.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 64 68 50 50
Homo sapiens 148 159 97 101

External Database Links

  • Repbase : UCON5 [Requires Repbase registration] Report