Interspersed repeats conserved in mammals and birds, UCON14 subfamily
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Found in the chicken genome. One copy comprises an alternative coding exon for PCBP3, shared between mammals, birds, and amphibia. UCON14 is largely palindromic.
Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.
Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J;
Genome Res 2007;17:992-1004 Pubmed
Repetitive sequences in complex genomes: structure and evolution.
Jurka J, Kapitonov VV, Kohany O, Jurka MV;
Annu Rev Genomics Hum Genet 2007;8:241-259 Pubmed
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 344 positions long. The average length of non-redundant hits to the model is 163.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|