PRIMA4_LTR (DF0001054)

PRIMA4_LTR (Long Terminal Repeat) for PRIMA4 endogenous retrovirus

Description

PRIMA4_LTR is the long terminal repeat for the PRIMA4 endogenous retrovirus. The internal part of PRIMA4 is PRIMA4-int. PRIMA4 is related to the Class I retroviruses, including leukemia viruses. Solo LTRs are flanked by 4bp TSDs.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 594 positions long. The average length of non-redundant hits to the model is 394.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 333 8607 311 5855

External Database Links

  • Repbase : PRIMA4_LTR [Requires Repbase registration]