Internal region of ERV1 endogenous retrovirus, PABL_B-int subfamily
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PABL_B appears to be an autonomous endogenous retrovirus (Gag+ Pol+Env), composed of this PABL_B-int internal region, and the PABL_B LTR. This is related to the HERV3/HERV4/HERVE group of ERVs.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 7122 positions long. The average length of non-redundant hits to the model is 751.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : PABL_BI [Requires Repbase registration]