PABL_B (DF0001050)

PABL_B Long Terminal Repeat for ERV1 endogenous retrovirus

Description

PABL_B is an LTR for PABL_B-int endogenous retrovirus.

References

  1. A boundary of long-range G + C% mosaic domains in the human MHC locus: pseudoautosomal boundary-like sequence exists near the boundary.
    Fukagawa T, Sugaya K, Matsumoto K, Okumura K, Ando A, Inoko H, Ikemura T;
    Genomics 1995;25:184-191 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 667 positions long. The average length of non-redundant hits to the model is 420.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 167 988 164 971

External Database Links

  • Repbase : PABL_B [Requires Repbase registration]