PABL_B Long Terminal Repeat for ERV1 endogenous retrovirus
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
PABL_B is an LTR for PABL_B-int endogenous retrovirus.
A boundary of long-range G + C% mosaic domains in the human MHC locus: pseudoautosomal boundary-like sequence exists near the boundary.
Fukagawa T, Sugaya K, Matsumoto K, Okumura K, Ando A, Inoko H, Ikemura T;
Genomics 1995;25:184-191 Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 667 positions long. The average length of non-redundant hits to the model is 420.3. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : PABL_B [Requires Repbase registration]