MST-int (DF0001046)

Internal region of ERVL-MaLR retrotransposon, MST-int subfamily

Description

MST-int encodes an ORF (pos ~48..1469) derived from an ERVL-like GAG protein. Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Synonyms: MST_I

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 1651 positions long. The average length of non-redundant hits to the model is 896. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 3060 25264 2907 23315

External Database Links

  • Repbase : MST_I [Requires Repbase registration]