MSTB1 (DF0001043)

MSTB1 Long Terminal Repeat for ERVL-MaLR retrotransposon

Description

MSTB1 has 5 bp TSDs. This is an intermediate subfamily between MSTB and MSTC Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 432 positions long. The average length of non-redundant hits to the model is 360.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 3661 151552 3445 120153

External Database Links

  • Repbase : MSTB1 [Requires Repbase registration]