MLT2F (DF0001038)

MLT2F Long Terminal Repeat for ERVL endogenous retrovirus

Description

MLT2F is an ERVL LTR. However, a related LTR was "absorbed" by a mobile Ricksha DNA transposon; explaining this cross-Type homology. A segment of of MLT2F (position ~177-366) shows roughly 80% identity to the coding portion of apoprotein exon 3 (APO IV).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL Article

Hit Statistics

The model is 663 positions long. The average length of non-redundant hits to the model is 363.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 593 904 454 568
Homo sapiens 1582 12857 1313 4437

External Database Links

  • Repbase : MLT2F [Requires Repbase registration]