MLT2B5 (DF0001033)
MLT2B5 Long Terminal Repeat for ERVL endogenous retrovirus
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
MLT2B5 is an ERVL LTR. However, a related LTR was "absorbed" by a mobile Ricksha DNA transposon; explaining this cross-Type homology.
Synonyms: MLT2B3
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | Retrotransposon | Article |
| Class | LTR | Article |
| Superfamily | ERVL | Article |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 717 positions long. The average length of non-redundant hits to the model is 236.6. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Mus musculus | 636 | 20078 | 343 | 6317 |
| Homo sapiens | 2925 | 47240 | 2361 | 33366 |
External Database Links
- Repbase : MLT2B3 [Requires Repbase registration]