MLT2A2 (DF0001028)

MLT2A2 Long Terminal Repeat for ERVL endogenous retrovirus

Description

MLT2A2 is an ERVL LTR. However, a related LTR was "absorbed" by a mobile Ricksha DNA transposon; explaining this cross-Type homology.

References

  1. Medium reiteration frequency repetitive sequences in the human genome.
    Kaplan DJ, Jurka J, Solus JF, Duncan CH;
    Nucleic Acids Res 1991;19:4731-4738 Pubmed

  2. Isolation of novel human endogenous retrovirus-like elements with foamy virus-related pol sequence.
    Cordonnier A, Casella JF, Heidmann T;
    J Virol 1995;69:5890-5897 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL Article

Hit Statistics

The model is 453 positions long. The average length of non-redundant hits to the model is 378.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 1604 27326 1506 21387

External Database Links

  • Repbase : MLT2A2 [Requires Repbase registration]