MLT2A1 Long Terminal Repeat for ERVL endogenous retrovirus
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
MLT2A1 is an ERVL LTR. However, a related LTR was "absorbed" by a mobile Ricksha DNA transposon; explaining this cross-Type homology.
Medium reiteration frequency repetitive sequences in the human genome.
Kaplan DJ, Jurka J, Solus JF, Duncan CH;
Nucleic Acids Res 1991;19:4731-4738 Pubmed
Isolation of novel human endogenous retrovirus-like elements with foamy virus-related pol sequence.
Cordonnier A, Casella JF, Heidmann T;
J Virol 1995;69:5890-5897 Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 444 positions long. The average length of non-redundant hits to the model is 360.3. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : MLT2A1 [Requires Repbase registration]