MLT1M (DF0001024)

MLT1M Long Terminal Repeat for ERVL-MaLR retrotransposon

Description

MLT1M has 5 bp TSD. Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 672 positions long. The average length of non-redundant hits to the model is 329.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 165 203 165 203
Homo sapiens 3145 8432 2248 4654

External Database Links

  • Repbase : MLT1M [Requires Repbase registration]