MLT1J-int (DF0001021)

Internal region of ERVL-MaLR retrotransposon, MLT1J-int subfamily

Description

This MaLR internal region is usually associated with MLT1J2 / MLT1J LTRs. Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 1387 positions long. The average length of non-redundant hits to the model is 456.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 783 1650 513 732
Homo sapiens 3037 24285 2429 11933

External Database Links

  • Repbase : MLT1J-int [Requires Repbase registration]