MLT1J1 (DF0001019)

MLT1J1 Long Terminal Repeat for ERVL-MaLR retrotransposon

Description

MLT1J1 has 5 bp TSDs. Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 444 positions long. The average length of non-redundant hits to the model is 271.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 1277 4918 651 2002
Homo sapiens 4508 52841 3523 25122

External Database Links

  • Repbase : MLT1J1 [Requires Repbase registration]