MLT1H-int (DF0001016)

Internal region of ERVL-MaLR retrotransposon, MLT1H-int subfamily

Description

MLT1H-int has an ORF (pos. ~49-1188) derived from an ERVL Gag protein. Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Synonyms: MLT1H_I

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 1409 positions long. The average length of non-redundant hits to the model is 442.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 577 2451 404 1104
Homo sapiens 2006 32709 1672 28162

External Database Links

  • Repbase : MLT1H_I [Requires Repbase registration]