MLT1E2 (DF0001007)

MLT1E2 Long Terminal Repeat for ERVL-MaLR retrotransposon

Description

MLT1E2 (Mammalian LTR Transposon) has 5 bp TSDs. Note that a full-length ERV-MaLR (Mammalian apparent LTR retrotransposon) element is derived from an ERV (Endogenous Retrovirus), but only contains the Gag gene (that is, no Pol or Env).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL-MaLR Article

Hit Statistics

The model is 627 positions long. The average length of non-redundant hits to the model is 313.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 1968 18658 1312 7546
Homo sapiens 5831 127457 5298 83312

External Database Links

  • Repbase : MLT1E2 [Requires Repbase registration]