MamRep488 (DF0000993)

Putative hAT DNA transposon, MamRep488 subfamily


MamRep488 has 8bp TSDs like hAT DNA transposons, but no consensus as found for Charlie elements. The terminal 29bp are similar to a hAT-Tip100 element in Zea mays (ZhAT5_ZM).


Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 219 positions long. The average length of non-redundant hits to the model is 166.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 59 105 20 33
Homo sapiens 685 2042 450 1027

External Database Links

  • Repbase : MamRep488 [Requires Repbase registration]