MamGypLTR2c (DF0000981)

MamGypLTR2c (Long Terminal Repeat) for Gypsy retrotransposon


MamGypLTR2c has 4bp TSDs. The 5' end has not been fully reconstructed, however that end is extended ~140bp farther than the similarly incomplete MamGypLTR2b.


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 1068 positions long. The average length of non-redundant hits to the model is 392.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 128 211 58 82
Homo sapiens 1283 4110 959 2405

External Database Links

  • Repbase : MamGypLTR2c [Requires Repbase registration]