MER96 (DF0000962)

hAT-Tip100 DNA transposon, MER96 subfamily (non-autonomous)

Description

MER96 is a palindrome with 8 bp TSDs. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 175 positions long. The average length of non-redundant hits to the model is 131. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 152 285 74 130
Homo sapiens 1173 3809 897 2206

External Database Links

  • Repbase : MER96 [Requires Repbase registration]