MER94 (DF0000959)

hAT-Blackjack DNA transposon, MER94 subfamily (non-autonomous)

Description

MER94 is a non-autonomous derivative of BLACKJACK with 14bp TIRs. The earliest reconstruction of this element was in the opposite orientation. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Blackjack

Hit Statistics

The model is 134 positions long. The average length of non-redundant hits to the model is 120.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 1050 1143 285 297
Homo sapiens 5309 7554 3972 4811

External Database Links

  • Repbase : MER94 [Requires Repbase registration]