MER92A (DF0000954)

MER92A Long Terminal Repeat for ERV1 endogenous retrovirus

Description

MER92A has 4 bp TSDs, and is distantly related to MER67D. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 412 positions long. The average length of non-redundant hits to the model is 296.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 38 81 27 44
Homo sapiens 167 849 141 621

External Database Links

  • Repbase : MER92A [Requires Repbase registration]