MER90a (DF0000950)

MER90a Long Terminal Repeat for ERV1 endogenous retrovirus


MER90a has 4 bp TSDs. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: MER90a_LTR


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 614 positions long. The average length of non-redundant hits to the model is 376.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 370 911 312 633
Homo sapiens 659 2355 631 2006

External Database Links

  • Repbase : MER90a_LTR [Requires Repbase registration]