MER76 (DF0000931)

MER76 putative Long Terminal Repeat for ERVL endogenous retrovirus

Description

MER76 is probably an LTR: it has 5 bp TSDs, and a (ATTAAA) polyA signal. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL Article

Hit Statistics

The model is 691 positions long. The average length of non-redundant hits to the model is 422. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 232 283 177 205
Homo sapiens 509 750 489 710

External Database Links

  • Repbase : MER76 [Requires Repbase registration]