MER70C (DF0000920)

MER70C Long Terminal Repeat for ERVL endogenous retrovirus

Description

MER70C has 5 bp TSDs, and is only distantly related to the other MER70 variants. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVL Article

Hit Statistics

The model is 531 positions long. The average length of non-redundant hits to the model is 377.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 91 107 75 81
Homo sapiens 227 402 213 317

External Database Links